The detailed information of tRNA gene sequence


Sequence ID>C121007021
Genome IDCP003154
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThiocystis violascens DSM 198 [CP003154]
Start position on genome 1474979
End posion on genome 1474903
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gatccgaagc
tRNA gene sequence 
CGGGGTATAGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCGAA
TCCCTCTACCCCGACCA
Downstream region at tRNA end position 
acatgcgaaa
Secondary structure (Cloverleaf model)
>C121007021	Pro	TGG
                   c      ACCA acatgcgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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