The detailed information of tRNA gene sequence


Sequence ID>C151008310
Genome IDCP006004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus O1:Kuk str. FDA_R31 [CP006004, CP006005]
Start position on genome 339802
End posion on genome 339727
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaatccagt
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACT
CCCCTACGGGATACCA
Downstream region at tRNA end position 
ttgggtcgtt
Secondary structure (Cloverleaf model)
>C151008310	Glu	TTC
                   t      ACCA ttgggtcgtt
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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