The detailed information of tRNA gene sequence


Sequence ID>C151015104
Genome IDCP006944
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMannheimia varigena USDA-ARS-USMARC-1312 [CP006944]
Start position on genome 749106
End posion on genome 749030
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catcatttgt
tRNA gene sequence 
CGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGTAGGTTCAAA
TCCTATCTCGCCGACCA
Downstream region at tRNA end position 
cttctttttt
Secondary structure (Cloverleaf model)
>C151015104	Pro	TGG
                   t      ACCA cttctttttt
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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