The detailed information of tRNA gene sequence


Sequence ID>C151031109
Genome IDCP007655
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae TSY216 [CP007653, CP007654, CP007655]
Start position on genome 322016
End posion on genome 321941
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctccacattt
tRNA gene sequence 
GGAGATGTAGTCTAGTGGTTATGACGCTTGCCTGTCACGCAAGAGGTCGCGGGTTCAATC
CCCGTCATCTCCGCCA
Downstream region at tRNA end position 
ttttaattct
Secondary structure (Cloverleaf model)
>C151031109	Asp	GTC
                   t      GCCA ttttaattct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       T C T G       G C G G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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