The detailed information of tRNA gene sequence


Sequence ID>C151087958
Genome IDCP011956
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzicola BLS279 [CP011956]
Start position on genome 1977923
End posion on genome 1977847
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcggctcctt
tRNA gene sequence 
CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
gttcaaaaca
Secondary structure (Cloverleaf model)
>C151087958	Pro	CGG
                   t      ACCA gttcaaaaca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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