The detailed information of tRNA gene sequence


Sequence ID>C151088193
Genome IDCP011961
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzicola RS105 [CP011961]
Start position on genome 1852525
End posion on genome 1852614
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcagcatc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGAAGGGTCAAACCTT
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tagaagtgca
Secondary structure (Cloverleaf model)
>C151088193	Ser	TGA
                   c      GCCA tagaagtgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAAGGGTCAAACCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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