The detailed information of tRNA gene sequence


Sequence ID>C151100229
Genome IDHG322950
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas knackmussii B13 [HG322950]
Start position on genome 5238051
End posion on genome 5237975
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccagctttga
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
gttttggcag
Secondary structure (Cloverleaf model)
>C151100229	Met	CAT
                   a      ACCA gttttggcag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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