The detailed information of tRNA gene sequence


Sequence ID>C153000176
Genome IDCP006262
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O145:H28 str. RM13516 [CP006262]
Start position on genome 1303124
End posion on genome 1303037
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgacaatt
tRNA gene sequence 
TGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTAT
CGGGGGTTCGAATCCCCCCTCACCGCCAg
Downstream region at tRNA end position 
attataagcg
Secondary structure (Cloverleaf model)
>C153000176	Ser	GGA
                   t      CCAg attataagcg
                     T + G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    G     C C C C C     A
    T G A G        T      | | | | |     G
  G         C C T G       G G G G G     C
  G           | +                   T T
  C         A G G A
    T G A          G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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