The detailed information of tRNA gene sequence


Sequence ID>C161005258
Genome IDCP007158
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii H558 [CP007158]
Start position on genome 88027
End posion on genome 87952
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctttgcagcg
tRNA gene sequence 
GTGGCTGTAGCTCAGTTGGTAGAGTCCCGGATTGTGATTCCGGTTGTCGTGGGTTCGAGC
CCCATCAGCCACCCCA
Downstream region at tRNA end position 
ccgaatgtag
Secondary structure (Cloverleaf model)
>C161005258	His	GTG
                   g      CCCA ccgaatgtag
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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