The detailed information of tRNA gene sequence


Sequence ID>C161047168
Genome IDCP012900
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStenotrophomonas acidaminiphila ZAC14D2_NAIMI4_2 [CP012900]
Start position on genome 1790712
End posion on genome 1790636
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcggctcctt
tRNA gene sequence 
CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
gttcgacaaa
Secondary structure (Cloverleaf model)
>C161047168	Pro	CGG
                   t      ACCA gttcgacaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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