The detailed information of tRNA gene sequence


Sequence ID>C161063172
Genome IDCP013975
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsia salmonis CGR02 [CP013975]
Start position on genome 643908
End posion on genome 643833
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcgttttatt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTACAATGGCATTGTAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
aacacatacc
Secondary structure (Cloverleaf model)
>C161063172	Ala	GGC
                   t      ACCA aacacatacc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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