The detailed information of tRNA gene sequence


Sequence ID>C161086888
Genome IDCP015379
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHafnia alvei HUMV-5920 [CP015379]
Start position on genome 665865
End posion on genome 665773
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatgcgtaa
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGTCAAAAGCT
GCATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
ttttgcaccc
Secondary structure (Cloverleaf model)
>C161086888	Ser	GCT
                   a      GCCA ttttgcaccc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTCAAAAGCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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