The detailed information of tRNA gene sequence


Sequence ID>C161098831
Genome IDCP016553
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter actinomycetemcomitans IDH781 [CP016553]
Start position on genome 123808
End posion on genome 123884
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacgctcact
tRNA gene sequence 
GCCCCCATAGCTCAGTCGGTCAGAGCAGTCGACTCATAATCGATTGGTCACAGGTTCAAG
TCCTGTTGGGGGCACCA
Downstream region at tRNA end position 
aaaaacttat
Secondary structure (Cloverleaf model)
>C161098831	Met	CAT
                   t      ACCA aaaaacttat
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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