The detailed information of tRNA gene sequence


Sequence ID>C171001793
Genome IDCP009111
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus opacus 1CP [CP009111]
Start position on genome 5127987
End posion on genome 5127911
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgcggcgat
tRNA gene sequence 
GGGGCGGTAGCTCAGTCGGTTAGAGCCGTGGACTCATAATCCATTGGTCGCGGGTTCGAG
CCCCGCCCGCCCCACCG
Downstream region at tRNA end position 
tcttccgcgg
Secondary structure (Cloverleaf model)
>C171001793	Met	CAT
                   t      ACCG tcttccgcgg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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