The detailed information of tRNA gene sequence


Sequence ID>C171001805
Genome IDCP009111
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus opacus 1CP [CP009111]
Start position on genome 471996
End posion on genome 471909
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctcctccac
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGTTAACGCCCTC
AGGGGTTCAAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
caggaacccc
Secondary structure (Cloverleaf model)
>C171001805	Ser	GGA
                   c      GCCA caggaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAACGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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