The detailed information of tRNA gene sequence


Sequence ID>C171011346
Genome IDCP011695
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis H437 [CP011695]
Start position on genome 6511
End posion on genome 6584
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
agggtggcct
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGAAGCCTTCCAAGCTTACGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
agatttgccc
Secondary structure (Cloverleaf model)
>C171011346	Gly	TCC
                   t      TCCA agatttgccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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