The detailed information of tRNA gene sequence


Sequence ID>C171022096
Genome IDCP013248
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus FORC_022 [CP013248, CP013249]
Start position on genome 3098610
End posion on genome 3098535
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cagtgacatt
tRNA gene sequence 
GCGACACTAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCACGAGTTCGAAC
CTCGTGTGTCGCTCCA
Downstream region at tRNA end position 
aatttatatt
Secondary structure (Cloverleaf model)
>C171022096	Gly	GCC
                   t      TCCA aatttatatt
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G          C A
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.-

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