The detailed information of tRNA gene sequence


Sequence ID>C171022948
Genome IDCP013313
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae E9120 [CP013313, CP013314]
Start position on genome 488561
End posion on genome 488486
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagtagattt
tRNA gene sequence 
GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAGTCGGCACCA
Downstream region at tRNA end position 
ttaaaaataa
Secondary structure (Cloverleaf model)
>C171022948	Thr	TGT
                   t      ACCA ttaaaaataa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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