The detailed information of tRNA gene sequence


Sequence ID>C171082913
Genome IDCP018731
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas hortorum pv. gardneri ICMP 7383 [CP018731]
Start position on genome 1388706
End posion on genome 1388614
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cggcaggtac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGTCTAAACCGC
GCTTCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttatgat
Secondary structure (Cloverleaf model)
>C171082913	Ser	GGA
                   c      GCCA gttttatgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGCGTCTAAACCGCGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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