The detailed information of tRNA gene sequence


Sequence ID>C171084371
Genome IDCP018806
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHistophilus somni USDA-ARS-USMARC-63370 [CP018806]
Start position on genome 1580961
End posion on genome 1580886
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atcaaatgtg
tRNA gene sequence 
GTGGCTATAGCTCAGTTGGTAGAGCCCCGGATTGTGATTCCGGTTGTCGTGGGTTCAAGT
CCCATTAGCCACCCCA
Downstream region at tRNA end position 
attagtcggc
Secondary structure (Cloverleaf model)
>C171084371	His	GTG
                   g      CCCA attagtcggc
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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