The detailed information of tRNA gene sequence


Sequence ID>C171084397
Genome IDCP018807
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHistophilus somni USDA-ARS-USMARC-63373 [CP018807]
Start position on genome 494893
End posion on genome 494968
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttggcttaag
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCACTGGTTCGAGA
CCGGTATCGCCCACCA
Downstream region at tRNA end position 
ctttagccgg
Secondary structure (Cloverleaf model)
>C171084397	Val	TAC
                   g      ACCA ctttagccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          A G
                    T     T G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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