The detailed information of tRNA gene sequence


Sequence ID>C171104289
Genome IDCP020100
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalopseudomonas phragmitis S-6-2 [CP020100]
Start position on genome 460712
End posion on genome 460636
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagattcga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
gtcacagggc
Secondary structure (Cloverleaf model)
>C171104289	Met	CAT
                   a      ACCA gtcacagggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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