The detailed information of tRNA gene sequence


Sequence ID>C171104291
Genome IDCP020100
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalopseudomonas phragmitis S-6-2 [CP020100]
Start position on genome 378699
End posion on genome 378624
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gaaggtctac
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTGGCTCCACCA
Downstream region at tRNA end position 
tctcgcagtt
Secondary structure (Cloverleaf model)
>C171104291	Ala	TGC
                   c      ACCA tctcgcagtt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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