The detailed information of tRNA gene sequence


Sequence ID>C171105188
Genome IDCP020350
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPectobacterium brasiliense SX309 [CP020350]
Start position on genome 4218832
End posion on genome 4218907
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgcccattc
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAGT
CCAGCAGGGGCCACCA
Downstream region at tRNA end position 
tttttcaaat
Secondary structure (Cloverleaf model)
>C171105188	Met	CAT
                   c      ACCA tttttcaaat
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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