The detailed information of tRNA gene sequence


Sequence ID>C171114945
Genome IDCP020947
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium sp. CIAT894 [CP020947]
Start position on genome 3009628
End posion on genome 3009703
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggcgtcaa
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGGGGTTCGAGT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
tttcgtttaa
Secondary structure (Cloverleaf model)
>C171114945	Met	CAT
                   a      ACCA tttcgtttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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