The detailed information of tRNA gene sequence


Sequence ID>C171120443
Genome IDCP021529
Search identical group
Phylum/ClassBacillota
SpeciesPediococcus acidilactici SRCM101189 [CP021529]
Start position on genome 625706
End posion on genome 625781
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaatattaT
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCTCCCGCAATta
Downstream region at tRNA end position 
attggtccta
Secondary structure (Cloverleaf model)
>C171120443	Met	CAT
                   T      ATta attggtccta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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