The detailed information of tRNA gene sequence


Sequence ID>CHL090101461
Genome IDAY522329
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Indica Group
Start position on genome 44389
End posion on genome 44475
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agattatgga
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTCAAGGCGTAGCATTGGAACTGCTATGTAGACTTTTGTTTA
CCGAGGGTTCGAATCCCTCTCTTTCCGttt
Downstream region at tRNA end position 
ttcttaattc
Secondary structure (Cloverleaf model)
>CHL090101461	Ser	GGA
                   a      Gttt ttcttaattc
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T C A        G     TGTAGACTTTTGTTTACC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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