The detailed information of tRNA gene sequence


Sequence ID>CHL090102800
Genome IDEF115541
Search identical group
Phylum/ClassViridiplantae
SpeciesHordeum vulgare subsp. vulgare
Start position on genome 11822
End posion on genome 11735
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaggcggt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCTAGGAACT
ATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gcttattgaa
Secondary structure (Cloverleaf model)
>CHL090102800	Ser	TGA
                   t      Tttt gcttattgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        T     TATAGTTCTAGGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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