The detailed information of tRNA gene sequence


Sequence ID>CHL090103241
Genome IDX15901
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Japonica Group
Start position on genome 51218
End posion on genome 51292
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgataaatT
tRNA gene sequence 
GCCTACTTAACTCAGTGGTTAGAGTATTGCTTTCATACGGCGGGAGTCATTGGTTCAAAT
CCAATAGTAGGTAGgt
Downstream region at tRNA end position 
aggtagaaaa
Secondary structure (Cloverleaf model)
>CHL090103241	Met	CAT
                   T      AGgt aggtagaaaa
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      T G A        A      | | | | |     A
    G       C T C A       A T T G G     C
    G       | | | |                 T T
    T       G A G T
      T A          A     GAGTC
                    T + G
                    T + G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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