The detailed information of tRNA gene sequence


Sequence ID>CHL090103261
Genome IDX15901
Search identical group
Phylum/ClassViridiplantae
SpeciesOryza sativa Japonica Group
Start position on genome 11590
End posion on genome 11503
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attaggctgt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGATAGCTCCGGTCTTGAAAACCGGTATAGTTCTAGGAACT
ATCGAGGGTTCGAATCCCTCTCTCTCCTttt
Downstream region at tRNA end position 
gctttcctct
Secondary structure (Cloverleaf model)
>CHL090103261	Ser	TGA
                   t      Tttt gctttcctct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        T     TATAGTTCTAGGAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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