The detailed information of tRNA gene sequence


Sequence ID>CHL090800002
Genome IDAB042240
Search identical group
Phylum/ClassViridiplantae
SpeciesTriticum aestivum
Start position on genome 3944
End posion on genome 1384
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttttttatcT
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGTC
CCGGGCAACCCATat
Downstream region at tRNA end position 
ggaaactaga
Secondary structure (Cloverleaf model)
>CHL090800002	Lys	TTT
                   T      ATat ggaaactaga
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2487 (in A-loop)
GTGCGACTATGATCTTTTACACATTTGGATGAAACAACAAATTCGTCCAGACTCTTGGTAGAGTCTAGAA
GACCACGACTGATCCTCAAAGGTAATGAATGGAAAAAATAGCATGTCGTAATAAAATCAATTTCTTATTT
TGGATTTTTGGAATGGAATCCAAAATTACTGATTTTCTGGGTCTAGTGAATAAATGGATAGAGCCTGGCT
CCAATTCTGGTAAAATAAAAAGCAACGAGCTGAACTTCCTAATTGGAATGATTCCCCGCTCTAATTAGAC
GTTAAAAATAGATTAGTGCCGGATACGGGGAAAGGCTGGTTTTCCTATGAGTAGACCTTTGATTTTTTCT
TTTTTTTTTAGAAATCCTAATTATTCTTGATTTTGGATTGAAAAGGATGTTATGGATTGAATGTGTAAAA
GAAGCAGTATATTGATAAAGAGACTGTATCCCAAAGTCAAAAGAGCAATTGGCCTGCAAAAATAAAGGAT
TTGTTCTCTTTTGTAATTAGAACAAACATAAACAAATTGGATAGAAAAGGAGCGGAAAAAGATCCGTGGA
TTAGACTCCTTTTCTTCCCCAGGGGTTTGTATTAAAAAATGCAACACCCTGTTCTGACCATATTGCACTA
TGTATCATCATTCGATAAACCGAGAAATGCTTCTCTCTCTCTGATTCAAGTAGAAATACAAATGGAAAAA
TTCGAAGGGTATTCAGAAAAACATAAATCTCGTCAACAATACTTCGTCTACCCACTTCTCTTTCAGGAAT
ATATTTATGCATTTGCCCCTGATTATGGATTAAATGGTTCTGAACCTGTGGAAATAGTTGGTTGTAATAA
CAAGAAATTTAGTTCACTACTTGTGAAACGTTTAATTATTCGAATGTATCAGCAGAATTTTTTGGATAAC
TCGGTTAATCATCCTAACCAAGATCGATTATTGGATTACAAAAATTATTTTTATTCTGAGTTTTATTCTC
AGATTCTATCTGAAGGGTTTGCGATCGTTGTGGAAATCCCATTCTCGCTACGGGAATTATTTTGTCCGAA
AGAAAAAGAAATACCAAAGTTTCAGAATTTACGCTCTATTCATTCAATATTTCCCTTTTTTGAAGACAAA
TTTTTGCATTTGGATTATCTATCACATATAGAAATACCCTATCCTATCCATTTGGAAATCCTGGTTCAAC
TCCTTCAATACCGTATCCAAGATGTTCCATCCTTGCATTTATTGCGATTTCTTCTCAACTACTATTCGAA
TTGGAATAGTTTTATTACTTCAATGAAATCCATTTTTATTTTCAAAAAAGAAAATAAAAGACTATTTCGA
TTCCTATATAACTCTTATGTATCAGAATATGAATTTTTTTTGTTGTTTCTTCGTAAACAATCTTCTTGCT
TACCATTAGCATCTTCTGGAACTTTTCTGGAACGAATCCACTTTTCTAGGAAGATGGAACATTTTGGGAT
AATGTACCCTGGTTTTTCTCGGAAAACCCTATGGTTCTTTATGGATCCTCTTATGCATTATGTTCGATAT
CAAGGAAAGGCAATTCTTGCATCAAAAGGCACTTTTCTTTTGAAGAAGAAATGGAAATGCTACCTTATCA
ATTTATGGCAATATTATTTCTGTTTTTGGACTCAGCCGCGAAGAATCCATATAAACCAATTAGCAAACTC
TTGCTTCGATTTTATGGGGTACCTTTCAAGTGTACCAAAAAGTTCTTTGTTAGTAAGGAATCAAATGCTG
GAGAATTCATTTCTAATAGATACTCGAATGAAAAAATTCGATACCATAGTCCACGCTACTCTCCTCATAG
GATACTTATCAAAAGCTCAATTTTGTACTGGATCGGGGCATCCTATTAGTAAACCCATTTGGACAGATTT
ATCAGATTGGGATATTCTTGATCGGTTTGGTCGGATATGTAGAAATCTTTTTCATTATCACAGTGGATCT
TCAAAAAAGAAGACTTTGTATCGACTAAAGTATATACTTCGACTTTCATGCGCTAGAACTTTAGGTCCTA
AACATAAAAGCACGGTACGAGCTTTTATGCAATGGTTGGGTTCGGTATTTTTAGAAGAATTTTTTAGGGA
AGAAGAGCAAGTTTTTTCTTTGATGTTCGCCAAAACAACTTACTTTTCTTTCCGGGGATCGCACAGTGAG
CGTATTTGGTATTTGGATATTCTCCGTATCAATGATCTGGTGAATCCTCTTAATTAATCATTAAACAAAA
CTAATAAACTAGAAATGATTGATAAATGATCAAGGTAAAACTTTCACAGTTTCCATTCTGAAATGTTCTC
TGTACTATAATAAATTGTAAGTGAATCAACTTACTACTAAAAAAATTAGTAGACTTCCTCTTCGGAATAG
AAATAGCCTATTTCTACATAGGGATAGTCGTGTGCAATGAAAAATGCAAGCACGATTTGGGGAGAGGTTT
TTTCTCTATTGTAACAAGGAATAATTATCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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