The detailed information of tRNA gene sequence


Sequence ID>CHL090800152
Genome IDDQ317523
Search identical group
Phylum/ClassViridiplantae
SpeciesGlycine max
Start position on genome 4286
End posion on genome 1637
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aattgtattg
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGTC
CCGGGCAACCCACta
Downstream region at tRNA end position 
gaattaatat
Secondary structure (Cloverleaf model)
>CHL090800152	Lys	TTT
                   g      ACta gaattaatat
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2577 (in A-loop)
GAGCGATTCTATTTTTTACACATTTCTATGAAGCAATCGGTTCGTCCATACCATTGGTAGAGCTTGTAAA
ACCACGACTGATCCATAAAGGAATGAATGGAAAAAGTAGCATGTCGTATCGATGAAGAATTCTAAAAATA
TTTCATTCTCTTATAGGATCCGGCCAGAATTTTTGTTTGTGAATTCTTGGCTCGGAACAAAAAAATTCAG
TTGGGTTTAATTAATAAAGGGATAGAGCTTGGTGACTCCAATTATAATAGGGAAACAAAAAGCAACGAGC
TTTCATTTTTTTTATTTGAATGATTACCCCATCTAATTGTACGTTAAAAAGATATTAGTGCTTGATATGG
GAAAAGCTTTTCCGGTGAATGGATTATTTATTTTTGTTATGAGTCCTAACTATATAGCTATTTTCCATTA
TATTTTTGGGTAGCGATAAATGTGTAAAAGAAAGAGTATATTGATAAAGATATTTTTTCCAAAATCAAAA
GAGCGATTAGGTTGAAAAAAAATAAAGGATTCCTAACTAGCTTGTTATCCTAGAACAAAAATTAGGTGGA
AAAGCGATTAGAGAGAGTCCGTTGATGATTTTTACTTGTTTTGTAGGTATATATACATATACCTATAATT
CCCTGTTTTGATCATATCGCACTATGTATCATTTGATAATCCAATGAATCTCTGATTCTTTGTTTGACTA
AATAGACTTTTTTAATTTTAAATGGAGGAATCTCGAGCATATTTAGAACTCCATAGATCTCGACACCAGG
ACACCCTATACCCTCTTTTTTTCCGGGAATCTATTTACGGACTAGCTTGTGGTCATGGGTCCATTTTTGT
AGAAAATGTCGGTTATAACAATAAATTTAGTTTACTAATTGTAAAACGTTTAATTACTCGAATGTATCAA
CAGACTCATTTCATCATTTTTACTAACGATTCTAACAAAAATCCTTTTATGGGTTATAACAATCATTTTT
ATTCTCAAATAATATTAGAAGGTTTTGTTGTCGTCGTGGAGATTCTATTTTCCCTACAATTTTGTATATC
TTCCTTAAGGGAATTCGAAATCGTAAAATCTTATAATAATTTGCGATCAATTCATTCCATTTTTCCCTTT
TTCGAAGATAAACTGATATATTTAAATCATGAGTCAGATATACGAATACCCTATCCTATCCACCTGGAAA
TCTTGGTTCAAATCCTTCGATATTGGATAAAAGATGTCTCTTTCTTTCATTTATTAAGGTTTTTTTTTTC
TTATTATTATAATTGGAATAGTATTTTTACTCCAAAAAAATGGATTTCTACTTTTTTTTCAAAAAGTAAT
CCAAGATTTTTTTTGTTCCTATATAATTTATATGTATGGGAATATGAATCTATCTTTCTTTTTCTACGTA
ACAAATCCTCTAAGTTACGATTAAAATATTTTCGCGTTTTTTTTGAGCGAATTTTTTTCTATGAAAAAAT
AGAACATCTTGTAGAAGTATCTGTTAAGGATTGTTCATATACCTTATCATTCTTTAAGGATACTTTCATG
CATTATGTTAGATATCAAGGAAAATCCATTTTGGTTTCAAAGAATACTCCTCTTTTGATAAATAAATGGA
AATACTATTTTATCTATTTATGGCAATGTCATTTTGATATTTGGTCTCGACCAGGAACGATCCATATAAA
CCAATTATCCCAACATTCATTTCACTTTTTGGGCTATTTTTTAAGTATTCGGCCCAATCTTTCAGTGGTA
CGAAATCAGATGTTGCAAAATTCATTTCTAATAAAAATGGTTATGAAAAGGCTTGATACAATAGTTCCAA
TTATTCCTCTAATTAGATCATTGGCGAAAGCAAAATTTTGTAATGTATTTGGCCATCCCATTAGTAAGCC
GGTTTGGGCCAATTTATCTGATTTTGATATTATTGACCGGTTTTTGCGGATATGCCGAAATTTTTCTCAT
TATTACAATGGATCCGCAAAAAAAAAGAGTTTGTATCAAATAAGATATATACTTCGGCTTTCTTGTATAA
AAACTTTGGCTCGTAAGCACAAAAGTACTGCGCGCACTTTTTTGAAAAGATTAGGGTCAGAAAAATTATT
GGAAGAATTCTTTACAGAAGAAGAAGAGACTTTTTCTTTGATTTTTCCAAGAACTTCTTTTACTTTGAAG
AGGTTATATATAGGTCGGATTTGGTATTTGGATATTCTTGTCAGAAACGATTTCGTCAATCATTTCTAAT
ATAAAATAGGTTATGATACTTTGTAAATCGGTGTAAATAGGTAAATCGAAATTCTTATTAAATGAAGATA
AACAAAAAAATCATTTTTTTAGTATTCTATATTTTTTAGTATTCTATATCTATAGGATTTTGAAATGCTC
ACGGAGTAAGAGTCAAGATTCGGGGTTCATTAATTGACTATTTGACTTTCTTAGAGTCTTTTCCTAGGGA
AGTAATTCCGGTTTAGATGTATGCATAGGGAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTGGGGA
GGGATTTTTTATTGTTTTATTCTTGAATTTGATTAAAGAATAAATTATCTACTTCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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