The detailed information of tRNA gene sequence


Sequence ID>CHL090800288
Genome IDEF115543
Search identical group
Phylum/ClassViridiplantae
SpeciesAgrostis stolonifera
Start position on genome 4480
End posion on genome 1914
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttttttatcT
tRNA gene sequence 
GGGTTGCTAACTCAATGGTAGAGTACTCGGCTTTTAACCGACTAGTTCCGGGTTCGAGTC
CCGGGCAACCCATat
Downstream region at tRNA end position 
ggaaaataaa
Secondary structure (Cloverleaf model)
>CHL090800288	Lys	TTT
                   T      ATat ggaaaataaa
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G          T G
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     C T C A       C C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     TAGTT
                    C   C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A *
                  T       A
                    T T T
intron: position=39, length=2493 (in A-loop)
GTGCGACTATGATCTTTTACACATTTGGATGGAGCAACAAATTCGTCCAGACTCTTGGTAGAGTCTATAA
GACCACGACTGATCCTCAAGGGTAATGAATGGAAAAAATAGCATGTCGTAATAAAATCAATTTCTTTTTT
TGAATGGAATAAAAATTTTGAATGGAATAAAAATTACGATTTTCTGGGTCTAGTGAATAAATGGATAGAG
CTTAGCTCCAATTCTGGTAAAATAAAAAGCAACGAGCTTAACTTCCTAGTTGGAATAATTCCCCGCTCTA
ATTAGATGTTAAAAATAGATTAGTGCCGGATGCGGGGAAAGGTTGGGTTTTCCTATGAGTGGACCCTTTT
TTTTCTTTTTTTTTTTAGAAATCCTAATTATTCTTGAATTATGGATTGAATGTGTAAAAGAAGCAGTATA
TTGATAAAGGGGCTCCATTCCAAAGTCAAAAGAGCAATTGGCCTGCAAAAATAAAAAATTTATTCTGTTC
TCTTTTGTAATTTAGAACAAACATAAACTAATTGGGTAGAAAAGGAACGGAAAAAAATCTGTGGATTAGA
CTCCCTTTCTTTCCGGGGTTTGTATTAAAAAATGCAAGACCTTGTTCTGACCATATTGCACTATGTATCA
TCATTCGATAAACCGAGAAATGCTTCTTCTCTCTGATTCAAGTAGAAATACAAATGGAAAAATTTCAAGG
GTATTCAGAAAAACATAAATCTCGTCAACAATACTTTGTCTACCCACTTCTCTTTCAGGAGTATATTTAT
GCATTTGCCCATGATTATGGATTAAATGATTCAGAACCTGTGGAAATTGTTAGTTGTAATAACAAGAAAT
TTAGTTCACTACTTGTGAAACGTTTAATTACTCGAATGTATCAGCAGAATTTTTGGATTAACTCGGTTAA
TCATCCTAACCAAGATCAATTGTTGGATTACAAAATTGGTTTTTATTCTGAGTTTTATTCTCAGATTCTA
CCTGAGGGGTTTGCGATCGTTGTAGAAATCCCATTCTCGCTACGAGAATTATTTTGTCCGAAAGAAAAAG
AAATACCAAAGTTTCAGAATTTACGCTCTATTCATTCAATATTTCCCTTTTTAGAAGACAAATTTTTGCA
TTTGGATTATCTTTCACATATAGAAATACCCTATCCTATCCATTTTGAAATCTTGGTGCAACTCCTTCAA
TACCGTATCAAAGATGTTCCATCTTTGCATTTATTGCGATTCTTTCTCAACTACTATTCAAATTGGAATA
GTTTTATTACTTCAATGAAATCCATTTTTCTTTTTAAAAAAGAAAATAAAAGACTTTTTCGATTCTTATA
TAATTCTTATGTATCAGAATATGAATTTTTCTTGTTGTTTCTTCGTAAACAATCTTCTTCCTTACCATTA
TTATCTTCTGGAACTTTTCTGGAACGAATCATCTTTTCTAGGAAGATGGAACATTTTGGGATAATGTACC
CGGGTTTTTTTCGGAAAACCATATGGTTCTTTATGGATCCTCTGATGCATTATGTTCGCTATCAAGGAAA
GGCAATTCTTGGATCAAAAGGAACTCATTTTTTGAACAAGAAATGGAAATGGTACCTTATCAATTTTTGG
CAATATTTTTTCTCTTTTTGGACTCAGCCGCGAAGGATCCATCTAAACCAATTAGCAAACTCTTGCTTCG
ATTTTCTGGGGTACCTTTCAAGTGTACCAAAAAGTACTTTGTTAGTAAGGAATCAAATGCTGGAGAATTT
ATTTCTAATAAATACTCGAATGAAAAAATTCGATACCATAGTTCCCGCTACTGCCCTCATAGGGTACTTA
TCAAAAGCTCAATTTTGTACTGGATCGGGGCATCCTATTAGTAAACCCATTTGGACAGATTTATCAGATT
GGGATATTCTTGATCGATTTGGTCGCATATGTAGAAATCTTTTTCATTATCATAGTGGATCTTCGAAAAA
ACAGACTTTGTATCGCCTAAAGTATATACTTCGACTTTCATGCGCTAGAACTTTAGCTCGTAAACATAAA
AGCACGGTACGAACTTTTATGCAACGGTTGGGTTCGGCATTTTTAGAAGAATTTTTTACCGAAGAAGAGT
TAGTTTTTTCTTTGATGTTCACCAAAACAAGCCTTTTTTCTTTCCGTGGATCGCACAGTGAGCGTATTTG
GTATTTTGATATTATACGTATCAACGACCTGGTAAAGCCTCTTAATTAATCATTAGACAAAACTAATAAA
CAGAAAAGAAAGGGTAGATAAATGATCAAGATAAAACTTTCATATTTTGCATTCTGAAATGTTCTTTTTA
TTATAATAAAAAGTAGGCGAATCCACTTACTAATTTACGAATATAAAAAAATTAGTAGAACTTCCTCTTT
GGAATAGAAATAGGCTATTTCTACATAGGGAAAGTCGTGTGCAATGAAAAATGCAAGCACGATTTGGGGA
GAGATTTTTCTCTATTGTAACAAGGAAGAATTATCTACTCCAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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