The detailed information of tRNA gene sequence


Sequence ID>PHG0100096
Genome IDAJ604530
Search identical group
Phylum/ClassSiphoviridae
SpeciesEscherichia virus BF23 K-12 (AJ604530)
Start position on genome 3670
End posion on genome 3581
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaacaaat
tRNA gene sequence 
GGAAGGTAGGGCGTAGTGGTACGCAACTAGTCTTGAAAACTAGCCCGCTGTAGTGATACG
GTGATGGTTCGACTCCATTACCTTCCTCCA
Downstream region at tRNA end position 
attaactata
Secondary structure (Cloverleaf model)
>PHG0100096	Ser	TGA
                   t      TCCA attaactata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T C
                    A     T T A C C     A
      G A T        G      + | | | |     G
    T       G C G G       G A T G G     C
    G       | | |                   T T
    G       C G C A
      T A          A     CCCGCTGTAGTGATACGGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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