The detailed information of tRNA gene sequence


Sequence ID>PHG0100379
Genome IDDQ003638
Search identical group
Phylum/ClassMyoviridae
SpeciesListeria virus A511 T4dC-46 (DQ003638)
Start position on genome 31344
End posion on genome 31258
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgtttctt
tRNA gene sequence 
GGAGAGTTGTCAGAGAGGCTTAATGATACGGGTTGCTAACTCGTTGTACTAGTAATAGTA
CCAAGGGTTCGAATCCCTTACTCTCCTttc
Downstream region at tRNA end position 
gaaaaaaggt
Secondary structure (Cloverleaf model)
>PHG0100379	Ser	GCT
                   t      Tttc gaaaaaaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G A C T       A A G G G     C
    G         | | |                 T T
    C       A T G A
      T T A        T     TGTACTAGTAATAGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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