The detailed information of tRNA gene sequence


Sequence ID>PL171000193
Genome IDAP018274
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid1
Start position on genome 1709838
End posion on genome 1709763
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacttttcT
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTTAGAGTAGGGGACTCATAAGCCCTTGGTCGTGCGTTCGAG
TCGCACCTGAGCCATaa
Downstream region at tRNA end position 
atatactaat
Secondary structure (Cloverleaf model)
>PL171000193	Met	CAT
                   T      ATaa atatactaat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C A C G C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G C G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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