The detailed information of tRNA gene sequence


Sequence ID>PL171000244
Genome IDCP000428
Search identical group
Phylum/ClassFirmicutes
SpeciesLactococcus lactis subsp. cremoris SK11 plasmid:3
Start position on genome 59178
End posion on genome 59105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acacttgcga
tRNA gene sequence 
AGTGGGATGGAGCAGTTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTATTCCCGCAAtat
Downstream region at tRNA end position 
tttaagggct
Secondary structure (Cloverleaf model)
>PL171000244	Met	CAT
                   a      Atat tttaagggct
                     A   A
                     G - C
                     T + G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    T       C G A G       A T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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