The detailed information of tRNA gene sequence


Sequence ID>PL171000849
Genome IDCP012114
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli PSUO78 plasmid:pPSUO78_2
Start position on genome 42283
End posion on genome 42358
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccaccaaatt
tRNA gene sequence 
GCCGGTTTAGCTCAGTTGGTAGAGCGCCTGCCTTGTAAGCAGGATGTCAGCGGTTCGAGT
CCGTTAACCGGCACCA
Downstream region at tRNA end position 
atacaacgat
Secondary structure (Cloverleaf model)
>PL171000849	Thr	TGT
                   t      ACCA atacaacgat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     T T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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