Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Alveolata


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 75.03 Ser AGA 0 TCT 31.25 Tyr ATA 0 TAT 68.36 Cys ACA 0 TGT 10.07 T
GAA 2 TTC 2.81 GGA 0 TCC 0.30 GTA 2 TAC 2.00 GCA 2 TGC 0.89 C
Leu TAA 1 TTA 114.13 TGA 2 TCA 15.18 ochre TTA 0 TAA 3.85 opal Sec TCA 0 TGA 3.26 A
CAA 0 TTG 1.63 CGA 0 TCG 0.96 amber CTA 0 TAG 0.15 Trp CCA 2 TGG 2.96 G
C Leu AAG 0 CTT 9.41 Pro AGG 0 CCT 14.52 His ATG 0 CAT 9.92 Arg ACG 4 CGT 4.15 T
GAG 0 CTC 0.15 GGG 0 CCC 0.07 GTG 2 CAC 0.22 GCG 0 CGC 0.22 C
TAG 4 CTA 2.74 TGG 2 CCA 5.70 Gln TTG 2 CAA 25.03 TCG 0 CGA 1.48 A
CAG 0 CTG 0.07 CGG 0 CCG 0.59 CTG 0 CAG 0.89 CCG 0 CGG 0.15 G
A Ile AAT 0 ATT 74.36 Thr AGT 0 ACT 23.63 Asn ATT 0 AAT 103.47 Ser ACT 0 AGT 11.92 T
GAT 2 ATC 2.30 GGT 0 ACC 0.67 GTT 4 AAC 2.67 GCT 2 AGC 0.52 C
TAT 0 ATA 63.77 TGT 4 ACA 17.03 Lys TTT 2 AAA 126.57 Arg TCT 4 AGA 16.07 A
Met CAT 6 ATG 12.07 CGT 0 ACG 0.67 CTT 0 AAG 4.00 CCT 0 AGG 0.52 G
G Val AAC 0 GTT 10.96 Ala AGC 0 GCT 12.07 Asp ATC 0 GAT 20.96 Gly ACC 0 GGT 14.29 T
GAC 0 GTC 0.07 GGC 0 GCC 0.52 GTC 2 GAC 1.41 GCC 0 GGC 0.59 C
TAC 4 GTA 11.04 TGC 4 GCA 6.74 Glu TTC 2 GAA 26.96 TCC 2 GGA 21.18 A
CAC 0 GTG 0.30 CGC 0 GCG 0.37 CTC 0 GAG 1.78 CCC 0 GGG 2.37 G



BACK