Composite table

Alveolata


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 41.74 Ser AGA 0 TCT 19.46 Tyr ATA 0 TAT 29.27 Cys ACA 0 TGT 8.21 T
GAA 6 TTC 12.70 GGA 1 TCC 4.95 GTA 6 TAC 8.63 GCA 6 TGC 2.21 C
Leu TAA 3 TTA 62.80 TGA 5 TCA 16.14 ochre TTA 0 TAA 3.44 opal Sec TCA 0 TGA 0.54 A
CAA 2 TTG 13.00 CGA 1 TCG 7.34 amber CTA 0 TAG 0.57 Trp CCA 6 TGG 12.34 G
C Leu AAG 0 CTT 15.47 Pro AGG 0 CCT 13.57 His ATG 0 CAT 11.75 Arg ACG 9 CGT 15.47 T
GAG 0 CTC 3.57 GGG 0 CCC 3.31 GTG 5 CAC 5.13 GCG 0 CGC 4.53 C
TAG 9 CTA 10.73 TGG 7 CCA 16.91 Gln TTG 6 CAA 32.08 TCG 0 CGA 14.42 A
CAG 0 CTG 5.77 CGG 0 CCG 3.52 CTG 0 CAG 6.39 CCG 2 CGG 2.92 G
A Ile AAT 0 ATT 59.93 Thr AGT 0 ACT 19.19 Asn ATT 0 AAT 44.83 Ser ACT 0 AGT 15.98 T
GAT 9 ATC 10.73 GGT 0 ACC 6.17 GTT 9 AAC 12.37 GCT 6 AGC 4.86 C
TAT 0 ATA 17.11 TGT 9 ACA 24.00 Lys TTT 7 AAA 63.10 Arg TCT 9 AGA 10.49 A
Met CAT 15 ATG 18.02 CGT 0 ACG 6.52 CTT 0 AAG 8.96 CCT 0 AGG 2.22 G
G Val AAC 0 GTT 26.25 Ala AGC 0 GCT 22.23 Asp ATC 0 GAT 28.61 Gly ACC 0 GGT 25.34 T
GAC 0 GTC 6.33 GGC 0 GCC 8.03 GTC 6 GAC 8.09 GCC 3 GGC 6.63 C
TAC 9 GTA 17.34 TGC 11 GCA 21.58 Glu TTC 6 GAA 41.28 TCC 6 GGA 24.07 A
CAC 0 GTG 8.47 CGC 0 GCG 6.51 CTC 0 GAG 9.19 CCC 0 GGG 6.67 G



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