Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Aquificae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 38.15 Ser AGA 0 TCT 16.76 Tyr ATA 0 TAT 20.71 Cys ACA 0 TGT 5.20 T
GAA 16 TTC 11.65 GGA 16 TCC 7.87 GTA 16 TAC 20.85 GCA 16 TGC 3.68 C
Leu TAA 16 TTA 23.37 TGA 16 TCA 11.07 ochre TTA 0 TAA 1.62 opal Sec TCA 8 TGA 1.16 A
CAA 16 TTG 12.63 CGA 13 TCG 2.83 amber CTA 0 TAG 0.52 Trp CCA 17 TGG 8.59 G
C Leu AAG 0 CTT 33.57 Pro AGG 0 CCT 13.91 His ATG 0 CAT 8.78 Arg ACG 16 CGT 2.06 T
GAG 16 CTC 11.57 GGG 16 CCC 7.96 GTG 16 CAC 7.47 GCG 0 CGC 1.65 C
TAG 16 CTA 10.32 TGG 16 CCA 12.31 Gln TTG 16 CAA 13.27 TCG 0 CGA 0.80 A
CAG 14 CTG 10.32 CGG 12 CCG 4.60 CTG 1 CAG 11.46 CCG 16 CGG 1.01 G
A Ile AAT 0 ATT 20.22 Thr AGT 0 ACT 10.82 Asn ATT 0 AAT 18.90 Ser ACT 0 AGT 8.43 T
GAT 27 ATC 11.06 GGT 16 ACC 10.86 GTT 16 AAC 22.84 GCT 16 AGC 9.91 C
TAT 0 ATA 51.10 TGT 16 ACA 16.92 Lys TTT 21 AAA 56.96 Arg TCT 16 AGA 23.27 A
Met CAT 48 ATG 20.93 CGT 13 ACG 5.62 CTT 11 AAG 31.74 CCT 15 AGG 15.21 G
G Val AAC 0 GTT 26.49 Ala AGC 0 GCT 22.63 Asp ATC 0 GAT 32.89 Gly ACC 0 GGT 22.82 T
GAC 16 GTC 5.98 GGC 15 GCC 13.59 GTC 16 GAC 17.18 GCC 18 GGC 10.80 C
TAC 16 GTA 23.90 TGC 27 GCA 19.19 Glu TTC 21 GAA 46.86 TCC 17 GGA 22.93 A
CAC 10 GTG 15.77 CGC 10 GCG 6.02 CTC 1 GAG 32.34 CCC 12 GGG 8.12 G



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