Composite table

Baculoviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 38.31 Ser AGA 0 TCT 7.30 Tyr ATA 0 TAT 17.04 Cys ACA 0 TGT 10.03 T
GAA 0 TTC 9.17 GGA 0 TCC 6.52 GTA 0 TAC 25.78 GCA 0 TGC 14.75 C
Leu TAA 0 TTA 17.45 TGA 0 TCA 6.68 ochre TTA 0 TAA 2.60 opal Sec TCA 0 TGA 0.62 A
CAA 0 TTG 33.47 CGA 0 TCG 13.35 amber CTA 0 TAG 0.52 Trp CCA 0 TGG 8.02 G
C Leu AAG 0 CTT 9.50 Pro AGG 0 CCT 7.74 His ATG 0 CAT 8.96 Arg ACG 0 CGT 9.40 T
GAG 0 CTC 8.24 GGG 0 CCC 11.19 GTG 0 CAC 15.69 GCG 0 CGC 23.66 C
TAG 0 CTA 8.54 TGG 0 CCA 7.20 Gln TTG 1 CAA 26.19 TCG 0 CGA 6.77 A
CAG 0 CTG 18.21 CGG 0 CCG 15.32 CTG 4 CAG 12.76 CCG 0 CGG 5.81 G
A Ile AAT 1 ATT 27.35 Thr AGT 19 ACT 10.59 Asn ATT 0 AAT 26.21 Ser ACT 0 AGT 8.81 T
GAT 0 ATC 13.05 GGT 0 ACC 14.28 GTT 0 AAC 41.58 GCT 0 AGC 16.87 C
TAT 0 ATA 14.63 TGT 0 ACA 13.08 Lys TTT 0 AAA 44.42 Arg TCT 0 AGA 5.47 A
Met CAT 0 ATG 26.41 CGT 0 ACG 20.04 CTT 1 AAG 17.21 CCT 0 AGG 3.33 G
G Val AAC 0 GTT 14.31 Ala AGC 0 GCT 10.38 Asp ATC 0 GAT 22.32 Gly ACC 0 GGT 9.12 T
GAC 0 GTC 11.87 GGC 0 GCC 21.14 GTC 2 GAC 37.74 GCC 0 GGC 18.95 C
TAC 0 GTA 11.96 TGC 0 GCA 11.14 Glu TTC 0 GAA 34.59 TCC 0 GGA 5.47 A
CAC 0 GTG 33.27 CGC 0 GCG 26.09 CTC 0 GAG 17.78 CCC 0 GGG 3.75 G



BACK