Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

CandidatusKorarchaeota


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 4.82 Ser AGA 0 TCT 9.86 Tyr ATA 0 TAT 14.08 Cys ACA 0 TGT 1.67 T
GAA 1 TTC 33.45 GGA 1 TCC 17.78 GTA 2 TAC 20.45 GCA 1 TGC 6.75 C
Leu TAA 2 TTA 12.89 TGA 1 TCA 11.09 ochre TTA 0 TAA 0.88 opal Sec TCA 0 TGA 1.84 A
CAA 1 TTG 15.34 CGA 0 TCG 9.52 amber CTA 0 TAG 0.65 Trp CCA 1 TGG 11.32 G
C Leu AAG 0 CTT 9.25 Pro AGG 0 CCT 11.38 His ATG 0 CAT 7.11 Arg ACG 0 CGT 0.81 T
GAG 1 CTC 34.47 GGG 1 CCC 14.43 GTG 1 CAC 6.53 GCG 1 CGC 1.18 C
TAG 1 CTA 14.86 TGG 1 CCA 8.38 Gln TTG 1 CAA 4.58 TCG 1 CGA 0.63 A
CAG 1 CTG 22.18 CGG 1 CCG 10.53 CTG 1 CAG 10.69 CCG 1 CGG 0.71 G
A Ile AAT 0 ATT 9.11 Thr AGT 0 ACT 13.26 Asn ATT 0 AAT 14.92 Ser ACT 0 AGT 6.46 T
GAT 1 ATC 19.32 GGT 1 ACC 7.19 GTT 1 AAC 13.21 GCT 1 AGC 18.32 C
TAT 1 ATA 53.29 TGT 1 ACA 6.97 Lys TTT 1 AAA 14.25 Arg TCT 1 AGA 16.98 A
Met CAT 3 ATG 25.55 CGT 1 ACG 9.87 CTT 1 AAG 41.20 CCT 1 AGG 49.39 G
G Val AAC 0 GTT 14.60 Ala AGC 0 GCT 31.58 Asp ATC 0 GAT 39.83 Gly ACC 0 GGT 13.69 T
GAC 1 GTC 21.55 GGC 1 GCC 15.67 GTC 1 GAC 9.33 GCC 1 GGC 14.69 C
TAC 1 GTA 14.71 TGC 1 GCA 10.29 Glu TTC 1 GAA 19.95 TCC 1 GGA 21.43 A
CAC 1 GTG 22.17 CGC 1 GCG 11.96 CTC 1 GAG 61.35 CCC 1 GGG 27.80 G



BACK