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Composite table

Chlamydiae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 32.38 Ser AGA 0 TCT 29.20 Tyr ATA 0 TAT 22.21 Cys ACA 0 TGT 9.35 T
GAA 0 TTC 15.43 GGA 0 TCC 10.86 GTA 0 TAC 10.08 GCA 0 TGC 5.61 C
Leu TAA 0 TTA 33.27 TGA 0 TCA 11.08 ochre TTA 0 TAA 1.76 opal Sec TCA 0 TGA 0.56 A
CAA 0 TTG 18.31 CGA 0 TCG 6.41 amber CTA 0 TAG 0.84 Trp CCA 0 TGG 9.90 G
C Leu AAG 0 CTT 23.71 Pro AGG 0 CCT 21.44 His ATG 0 CAT 16.14 Arg ACG 0 CGT 12.71 T
GAG 0 CTC 11.97 GGG 0 CCC 6.96 GTG 0 CAC 7.09 GCG 0 CGC 7.76 C
TAG 0 CTA 13.60 TGG 0 CCA 9.70 Gln TTG 0 CAA 27.29 TCG 0 CGA 7.40 A
CAG 0 CTG 9.12 CGG 0 CCG 4.32 CTG 0 CAG 13.44 CCG 0 CGG 3.51 G
A Ile AAT 0 ATT 36.61 Thr AGT 0 ACT 16.47 Asn ATT 0 AAT 26.91 Ser ACT 0 AGT 11.09 T
GAT 0 ATC 19.36 GGT 0 ACC 9.72 GTT 0 AAC 12.40 GCT 0 AGC 8.77 C
TAT 0 ATA 13.50 TGT 1 ACA 17.42 Lys TTT 0 AAA 43.52 Arg TCT 0 AGA 11.05 A
Met CAT 0 ATG 20.50 CGT 0 ACG 8.10 CTT 0 AAG 18.81 CCT 0 AGG 3.44 G
G Val AAC 0 GTT 23.37 Ala AGC 0 GCT 31.51 Asp ATC 0 GAT 35.14 Gly ACC 0 GGT 14.37 T
GAC 0 GTC 10.40 GGC 0 GCC 11.26 GTC 0 GAC 11.49 GCC 0 GGC 10.14 C
TAC 0 GTA 16.24 TGC 0 GCA 19.77 Glu TTC 0 GAA 44.12 TCC 0 GGA 24.89 A
CAC 0 GTG 12.40 CGC 0 GCG 9.38 CTC 0 GAG 21.79 CCC 0 GGG 12.62 G



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