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Composite table

Cloacimonetes


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 33.79 Ser AGA 0 TCT 14.31 Tyr ATA 0 TAT 33.26 Cys ACA 0 TGT 6.30 T
GAA 1 TTC 14.05 GGA 1 TCC 12.67 GTA 1 TAC 10.24 GCA 1 TGC 4.05 C
Leu TAA 1 TTA 24.86 TGA 1 TCA 10.02 ochre TTA 0 TAA 1.54 opal Sec TCA 0 TGA 0.76 A
CAA 1 TTG 16.98 CGA 1 TCG 3.77 amber CTA 0 TAG 0.49 Trp CCA 1 TGG 10.99 G
C Leu AAG 1 CTT 19.60 Pro AGG 0 CCT 14.96 His ATG 0 CAT 12.60 Arg ACG 1 CGT 6.39 T
GAG 0 CTC 6.49 GGG 1 CCC 10.13 GTG 1 CAC 4.06 GCG 0 CGC 5.41 C
TAG 1 CTA 5.75 TGG 1 CCA 6.15 Gln TTG 1 CAA 16.88 TCG 0 CGA 2.89 A
CAG 1 CTG 24.67 CGG 1 CCG 7.35 CTG 1 CAG 17.56 CCG 1 CGG 3.63 G
A Ile AAT 0 ATT 45.39 Thr AGT 0 ACT 18.64 Asn ATT 0 AAT 44.24 Ser ACT 0 AGT 13.23 T
GAT 1 ATC 20.53 GGT 1 ACC 13.87 GTT 1 AAC 14.81 GCT 1 AGC 9.58 C
TAT 0 ATA 23.11 TGT 1 ACA 15.13 Lys TTT 1 AAA 53.53 Arg TCT 1 AGA 14.81 A
Met CAT 3 ATG 21.37 CGT 1 ACG 4.66 CTT 1 AAG 16.41 CCT 1 AGG 5.18 G
G Val AAC 0 GTT 24.81 Ala AGC 0 GCT 23.74 Asp ATC 0 GAT 43.63 Gly ACC 0 GGT 21.83 T
GAC 1 GTC 5.93 GGC 1 GCC 14.21 GTC 1 GAC 11.03 GCC 2 GGC 10.80 C
TAC 1 GTA 15.34 TGC 1 GCA 18.69 Glu TTC 1 GAA 55.06 TCC 1 GGA 23.72 A
CAC 1 GTG 10.07 CGC 1 GCG 4.82 CTC 1 GAG 13.79 CCC 1 GGG 5.44 G



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