Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Cryptophyta


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 28.05 Ser AGA 0 TCT 19.33 Tyr ATA 0 TAT 21.90 Cys ACA 0 TGT 6.51 T
GAA 2 TTC 14.71 GGA 1 TCC 2.76 GTA 2 TAC 10.46 GCA 2 TGC 1.59 C
Leu TAA 2 TTA 59.57 TGA 2 TCA 17.83 ochre TTA 0 TAA 3.53 opal Sec TCA 0 TGA 0.26 A
CAA 3 TTG 9.73 CGA 0 TCG 3.71 amber CTA 0 TAG 0.72 Trp CCA 2 TGG 11.01 G
C Leu AAG 0 CTT 12.84 Pro AGG 0 CCT 15.49 His ATG 0 CAT 10.89 Arg ACG 2 CGT 14.37 T
GAG 0 CTC 1.93 GGG 0 CCC 1.66 GTG 2 CAC 5.07 GCG 0 CGC 2.76 C
TAG 2 CTA 15.91 TGG 2 CCA 16.66 Gln TTG 2 CAA 32.70 TCG 0 CGA 7.62 A
CAG 0 CTG 3.99 CGG 0 CCG 2.88 CTG 0 CAG 5.50 CCG 2 CGG 1.40 G
A Ile AAT 0 ATT 46.70 Thr AGT 0 ACT 23.92 Asn ATT 0 AAT 38.03 Ser ACT 0 AGT 16.49 T
GAT 4 ATC 12.58 GGT 0 ACC 3.00 GTT 2 AAC 13.94 GCT 2 AGC 4.81 C
TAT 0 ATA 25.27 TGT 2 ACA 25.57 Lys TTT 2 AAA 55.94 Arg TCT 2 AGA 21.42 A
Met CAT 6 ATG 20.48 CGT 0 ACG 4.77 CTT 0 AAG 12.55 CCT 0 AGG 2.28 G
G Val AAC 0 GTT 28.71 Ala AGC 0 GCT 33.54 Asp ATC 0 GAT 35.87 Gly ACC 0 GGT 34.73 T
GAC 0 GTC 4.96 GGC 0 GCC 4.51 GTC 2 GAC 9.10 GCC 2 GGC 6.76 C
TAC 1 GTA 25.81 TGC 4 GCA 24.03 Glu TTC 2 GAA 50.05 TCC 2 GGA 21.79 A
CAC 0 GTG 7.53 CGC 0 GCG 5.42 CTC 0 GAG 11.49 CCC 0 GGG 4.57 G



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