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Composite table

Fusobacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 36.55 Ser AGA 0 TCT 15.76 Tyr ATA 0 TAT 33.15 Cys ACA 0 TGT 6.26 T
GAA 0 TTC 9.97 GGA 0 TCC 6.07 GTA 2 TAC 7.42 GCA 0 TGC 2.08 C
Leu TAA 0 TTA 40.96 TGA 0 TCA 13.55 ochre TTA 0 TAA 1.96 opal Sec TCA 1 TGA 0.58 A
CAA 1 TTG 15.75 CGA 0 TCG 3.54 amber CTA 0 TAG 0.69 Trp CCA 0 TGG 7.88 G
C Leu AAG 0 CTT 15.68 Pro AGG 0 CCT 10.72 His ATG 0 CAT 10.32 Arg ACG 0 CGT 2.86 T
GAG 2 CTC 5.27 GGG 0 CCC 4.17 GTG 1 CAC 4.26 GCG 0 CGC 4.30 C
TAG 2 CTA 6.56 TGG 1 CCA 8.71 Gln TTG 1 CAA 17.73 TCG 0 CGA 2.98 A
CAG 0 CTG 11.04 CGG 0 CCG 6.57 CTG 0 CAG 8.20 CCG 0 CGG 3.91 G
A Ile AAT 0 ATT 41.14 Thr AGT 0 ACT 17.04 Asn ATT 0 AAT 44.70 Ser ACT 0 AGT 14.22 T
GAT 0 ATC 10.63 GGT 1 ACC 6.87 GTT 1 AAC 9.61 GCT 0 AGC 5.66 C
TAT 0 ATA 35.18 TGT 3 ACA 19.64 Lys TTT 3 AAA 70.66 Arg TCT 0 AGA 22.63 A
Met CAT 2 ATG 23.78 CGT 0 ACG 5.20 CTT 0 AAG 18.70 CCT 1 AGG 3.04 G
G Val AAC 0 GTT 23.25 Ala AGC 0 GCT 19.71 Asp ATC 0 GAT 39.41 Gly ACC 0 GGT 13.93 T
GAC 0 GTC 7.93 GGC 1 GCC 12.00 GTC 2 GAC 12.08 GCC 0 GGC 8.66 C
TAC 2 GTA 20.45 TGC 1 GCA 22.83 Glu TTC 4 GAA 62.28 TCC 3 GGA 36.69 A
CAC 0 GTG 12.00 CGC 0 GCG 9.40 CTC 0 GAG 17.41 CCC 0 GGG 7.86 G



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