Composite table

Fusobacteria


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 38.65 Ser AGA 0 TCT 13.68 Tyr ATA 0 TAT 39.57 Cys ACA 0 TGT 8.91 T
GAA 0 TTC 7.39 GGA 0 TCC 0.79 GTA 2 TAC 10.20 GCA 0 TGC 2.02 C
Leu TAA 0 TTA 46.35 TGA 0 TCA 13.13 ochre TTA 0 TAA 2.99 opal Sec TCA 1 TGA 0.49 A
CAA 1 TTG 11.48 CGA 0 TCG 1.65 amber CTA 0 TAG 1.04 Trp CCA 0 TGG 8.30 G
C Leu AAG 0 CTT 14.29 Pro AGG 0 CCT 10.56 His ATG 0 CAT 5.19 Arg ACG 0 CGT 3.11 T
GAG 2 CTC 0.67 GGG 0 CCC 0.43 GTG 1 CAC 4.52 GCG 0 CGC 0.00 C
TAG 2 CTA 10.50 TGG 1 CCA 8.37 Gln TTG 1 CAA 21.74 TCG 0 CGA 0.49 A
CAG 0 CTG 3.79 CGG 0 CCG 1.65 CTG 0 CAG 7.27 CCG 0 CGG 0.24 G
A Ile AAT 0 ATT 30.47 Thr AGT 0 ACT 22.23 Asn ATT 0 AAT 51.54 Ser ACT 0 AGT 17.95 T
GAT 0 ATC 4.70 GGT 1 ACC 2.20 GTT 1 AAC 19.42 GCT 0 AGC 5.13 C
TAT 0 ATA 54.04 TGT 3 ACA 26.13 Lys TTT 3 AAA 82.80 Arg TCT 0 AGA 31.45 A
Met CAT 2 ATG 25.34 CGT 0 ACG 3.18 CTT 0 AAG 24.30 CCT 1 AGG 3.97 G
G Val AAC 0 GTT 21.49 Ala AGC 0 GCT 25.16 Asp ATC 0 GAT 41.77 Gly ACC 0 GGT 22.53 T
GAC 0 GTC 2.63 GGC 1 GCC 2.32 GTC 2 GAC 15.27 GCC 0 GGC 3.42 C
TAC 2 GTA 25.58 TGC 1 GCA 12.64 Glu TTC 4 GAA 66.01 TCC 3 GGA 23.69 A
CAC 0 GTG 5.01 CGC 0 GCG 2.93 CTC 0 GAG 19.48 CCC 0 GGG 5.80 G



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