Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Glaucocystophyceae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 35.65 Ser AGA 0 TCT 24.02 Tyr ATA 0 TAT 26.49 Cys ACA 0 TGT 8.04 T
GAA 1 TTC 10.38 GGA 1 TCC 5.20 GTA 1 TAC 5.02 GCA 2 TGC 0.97 C
Leu TAA 1 TTA 82.04 TGA 1 TCA 11.25 ochre TTA 0 TAA 4.30 opal Sec TCA 0 TGA 0.19 A
CAA 1 TTG 4.18 CGA 1 TCG 1.74 amber CTA 0 TAG 0.93 Trp CCA 1 TGG 11.22 G
C Leu AAG 0 CTT 14.71 Pro AGG 0 CCT 14.46 His ATG 0 CAT 12.56 Arg ACG 1 CGT 25.80 T
GAG 1 CTC 1.06 GGG 0 CCC 1.40 GTG 1 CAC 3.33 GCG 0 CGC 3.65 C
TAG 1 CTA 5.55 TGG 1 CCA 19.47 Gln TTG 1 CAA 39.82 TCG 0 CGA 9.32 A
CAG 0 CTG 1.00 CGG 0 CCG 2.74 CTG 0 CAG 2.52 CCG 1 CGG 0.69 G
A Ile AAT 0 ATT 67.52 Thr AGT 0 ACT 28.07 Asn ATT 0 AAT 40.85 Ser ACT 0 AGT 17.26 T
GAT 2 ATC 8.07 GGT 1 ACC 5.05 GTT 1 AAC 7.67 GCT 1 AGC 2.90 C
TAT 0 ATA 11.72 TGT 1 ACA 19.85 Lys TTT 1 AAA 59.23 Arg TCT 1 AGA 8.88 A
Met CAT 3 ATG 19.63 CGT 0 ACG 3.40 CTT 0 AAG 5.55 CCT 0 AGG 0.50 G
G Val AAC 0 GTT 33.90 Ala AGC 0 GCT 32.25 Asp ATC 0 GAT 34.96 Gly ACC 0 GGT 35.77 T
GAC 1 GTC 1.87 GGC 0 GCC 3.12 GTC 1 GAC 5.83 GCC 1 GGC 4.86 C
TAC 1 GTA 24.74 TGC 2 GCA 31.97 Glu TTC 1 GAA 57.24 TCC 1 GGA 22.28 A
CAC 0 GTG 2.71 CGC 0 GCG 4.30 CTC 0 GAG 4.71 CCC 0 GGG 3.68 G



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