Home | tRNADB-CE : tRNA gene database curated manually by experts

Composite table

Iridoviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 37.62 Ser AGA 0 TCT 19.92 Tyr ATA 0 TAT 22.52 Cys ACA 0 TGT 12.11 T
GAA 0 TTC 9.54 GGA 0 TCC 10.41 GTA 0 TAC 16.37 GCA 0 TGC 9.05 C
Leu TAA 0 TTA 32.61 TGA 0 TCA 12.75 ochre TTA 0 TAA 2.96 opal Sec TCA 0 TGA 1.03 A
CAA 0 TTG 18.95 CGA 0 TCG 10.69 amber CTA 0 TAG 0.76 Trp CCA 0 TGG 11.55 G
C Leu AAG 0 CTT 11.76 Pro AGG 0 CCT 13.69 His ATG 0 CAT 10.52 Arg ACG 0 CGT 5.30 T
GAG 0 CTC 10.01 GGG 0 CCC 13.04 GTG 0 CAC 9.22 GCG 0 CGC 6.59 C
TAG 0 CTA 7.72 TGG 0 CCA 12.66 Gln TTG 0 CAA 23.39 TCG 0 CGA 6.23 A
CAG 0 CTG 11.38 CGG 0 CCG 9.27 CTG 0 CAG 10.50 CCG 0 CGG 3.85 G
A Ile AAT 0 ATT 32.42 Thr AGT 0 ACT 14.28 Asn ATT 0 AAT 32.56 Ser ACT 0 AGT 9.43 T
GAT 0 ATC 12.51 GGT 0 ACC 14.39 GTT 0 AAC 22.36 GCT 0 AGC 8.41 C
TAT 2 ATA 24.33 TGT 0 ACA 18.30 Lys TTT 0 AAA 58.42 Arg TCT 0 AGA 16.32 A
Met CAT 0 ATG 24.27 CGT 0 ACG 14.22 CTT 0 AAG 18.83 CCT 0 AGG 5.67 G
G Val AAC 0 GTT 20.31 Ala AGC 0 GCT 14.34 Asp ATC 0 GAT 29.78 Gly ACC 0 GGT 14.43 T
GAC 0 GTC 10.72 GGC 0 GCC 14.71 GTC 0 GAC 21.93 GCC 0 GGC 10.51 C
TAC 0 GTA 15.49 TGC 0 GCA 12.43 Glu TTC 0 GAA 43.00 TCC 0 GGA 19.17 A
CAC 0 GTG 15.37 CGC 0 GCG 13.57 CTC 0 GAG 15.28 CCC 0 GGG 8.29 G



BACK