Composite table

Mimiviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 37.76 Ser AGA 0 TCT 20.23 Tyr ATA 0 TAT 46.75 Cys ACA 0 TGT 15.95 T
GAA 0 TTC 8.20 GGA 0 TCC 5.71 GTA 1 TAC 8.93 GCA 25 TGC 2.36 C
Leu TAA 52 TTA 40.20 TGA 0 TCA 21.14 ochre TTA 0 TAA 2.09 opal Sec TCA 0 TGA 0.53 A
CAA 29 TTG 16.07 CGA 0 TCG 3.90 amber CTA 0 TAG 0.27 Trp CCA 22 TGG 7.78 G
C Leu AAG 0 CTT 12.19 Pro AGG 0 CCT 12.05 His ATG 0 CAT 17.34 Arg ACG 0 CGT 6.17 T
GAG 0 CTC 4.06 GGG 0 CCC 3.44 GTG 25 CAC 3.58 GCG 0 CGC 1.36 C
TAG 0 CTA 7.18 TGG 0 CCA 14.04 Gln TTG 0 CAA 28.31 TCG 0 CGA 3.91 A
CAG 0 CTG 2.20 CGG 0 CCG 2.46 CTG 0 CAG 2.85 CCG 0 CGG 0.49 G
A Ile AAT 0 ATT 60.73 Thr AGT 0 ACT 21.35 Asn ATT 0 AAT 82.37 Ser ACT 0 AGT 17.18 T
GAT 0 ATC 10.68 GGT 0 ACC 5.05 GTT 1 AAC 11.30 GCT 0 AGC 2.07 C
TAT 0 ATA 31.47 TGT 0 ACA 22.23 Lys TTT 3 AAA 81.18 Arg TCT 0 AGA 17.04 A
Met CAT 0 ATG 21.18 CGT 0 ACG 2.53 CTT 0 AAG 8.63 CCT 0 AGG 1.98 G
G Val AAC 0 GTT 22.10 Ala AGC 0 GCT 13.29 Asp ATC 0 GAT 57.56 Gly ACC 0 GGT 20.77 T
GAC 0 GTC 5.75 GGC 0 GCC 3.43 GTC 0 GAC 8.83 GCC 0 GGC 2.06 C
TAC 0 GTA 14.70 TGC 0 GCA 11.69 Glu TTC 0 GAA 48.67 TCC 0 GGA 21.43 A
CAC 0 GTG 4.45 CGC 0 GCG 1.93 CTC 0 GAG 5.22 CCC 0 GGG 1.64 G



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