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Composite table

Mimiviridae


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage AA anti
codon
tRNA codon usage
T phe AAA 0 TTT 35.83 Ser AGA 0 TCT 21.92 Tyr ATA 0 TAT 42.54 Cys ACA 0 TGT 15.67 T
GAA 0 TTC 10.27 GGA 0 TCC 6.31 GTA 0 TAC 11.69 GCA 1 TGC 2.30 C
Leu TAA 2 TTA 32.16 TGA 0 TCA 21.14 ochre TTA 0 TAA 1.72 opal Sec TCA 0 TGA 0.57 A
CAA 1 TTG 18.88 CGA 0 TCG 4.34 amber CTA 0 TAG 0.37 Trp CCA 1 TGG 7.37 G
C Leu AAG 0 CTT 13.63 Pro AGG 0 CCT 12.31 His ATG 0 CAT 16.22 Arg ACG 0 CGT 6.45 T
GAG 0 CTC 5.61 GGG 0 CCC 3.66 GTG 1 CAC 4.24 GCG 0 CGC 1.31 C
TAG 0 CTA 8.44 TGG 0 CCA 13.43 Gln TTG 0 CAA 27.86 TCG 0 CGA 4.27 A
CAG 0 CTG 2.68 CGG 0 CCG 2.79 CTG 0 CAG 3.44 CCG 0 CGG 0.53 G
A Ile AAT 0 ATT 61.61 Thr AGT 0 ACT 22.25 Asn ATT 0 AAT 74.87 Ser ACT 0 AGT 17.86 T
GAT 0 ATC 12.62 GGT 0 ACC 5.23 GTT 0 AAC 13.72 GCT 0 AGC 2.03 C
TAT 0 ATA 24.15 TGT 0 ACA 22.17 Lys TTT 0 AAA 79.46 Arg TCT 0 AGA 17.79 A
Met CAT 0 ATG 21.23 CGT 0 ACG 2.78 CTT 0 AAG 10.17 CCT 0 AGG 2.45 G
G Val AAC 0 GTT 23.98 Ala AGC 0 GCT 13.55 Asp ATC 0 GAT 56.61 Gly ACC 0 GGT 20.67 T
GAC 0 GTC 7.06 GGC 0 GCC 3.61 GTC 0 GAC 11.19 GCC 0 GGC 1.82 C
TAC 0 GTA 15.01 TGC 0 GCA 11.56 Glu TTC 0 GAA 48.80 TCC 0 GGA 22.01 A
CAC 0 GTG 4.26 CGC 0 GCG 1.84 CTC 0 GAG 5.96 CCC 0 GGG 1.75 G



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