Composite table

Nanoarchaeota


[Important Notice]
This table can browse both anticodon number and codon usage concurrently.
When you consider the correlation of codon usage with anticodon number (i.e., number of tRNA genes having the respective anticodon), you have to pay attention to "wobble pairing" between the codon third position and the anticodon first position. For example, G base at the anticodon first position can pair with either U or C at the codon third position, and thus one anticodon can recognize two codons. U at the anticodon first position can pair with either A or G at the codon third position, and thus the anticodon also can recognize two codons. Furthermore, there exist the cases where the anticodon first position is enzymatically modified resulting in change of the codon recognition pattern.
Number of tRNA genes / Codon usage (permillage)
T C A G
AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage AA anti
codon		 tRNA codon usage
T phe AAA 0 TTT 38.23 Ser AGA 0 TCT 19.88 Tyr ATA 0 TAT 58.52 Cys ACA 0 TGT 4.97 T
GAA 4 TTC 8.53 GGA 4 TCC 3.16 GTA 0 TAC 6.23 GCA 5 TGC 1.35 C
Leu TAA 2 TTA 66.14 TGA 3 TCA 17.61 ochre TTA 0 TAA 2.36 opal Sec TCA 0 TGA 0.70 A
CAA 4 TTG 15.41 CGA 8 TCG 1.85 amber CTA 0 TAG 0.64 Trp CCA 4 TGG 8.05 G
C Leu AAG 5 CTT 6.51 Pro AGG 0 CCT 9.49 His ATG 0 CAT 9.44 Arg ACG 0 CGT 0.49 T
GAG 4 CTC 1.10 GGG 10 CCC 2.48 GTG 6 CAC 1.09 GCG 5 CGC 0.22 C
TAG 5 CTA 11.07 TGG 3 CCA 20.03 Gln TTG 3 CAA 18.91 TCG 5 CGA 0.41 A
CAG 3 CTG 1.16 CGG 1 CCG 1.19 CTG 3 CAG 3.54 CCG 0 CGG 0.13 G
A Ile AAT 0 ATT 41.02 Thr AGT 0 ACT 11.86 Asn ATT 0 AAT 62.87 Ser ACT 0 AGT 10.89 T
GAT 5 ATC 4.09 GGT 9 ACC 2.73 GTT 3 AAC 8.43 GCT 4 AGC 3.63 C
TAT 1 ATA 75.26 TGT 10 ACA 22.76 Lys TTT 8 AAA 77.75 Arg TCT 3 AGA 26.24 A
Met CAT 7 ATG 16.17 CGT 11 ACG 1.40 CTT 2 AAG 19.93 CCT 8 AGG 7.60 G
G Val AAC 0 GTT 20.97 Ala AGC 0 GCT 12.83 Asp ATC 0 GAT 44.71 Gly ACC 0 GGT 14.99 T
GAC 4 GTC 1.68 GGC 2 GCC 2.83 GTC 11 GAC 4.80 GCC 7 GGC 3.43 C
TAC 5 GTA 27.19 TGC 4 GCA 21.56 Glu TTC 2 GAA 63.88 TCC 3 GGA 28.06 A
CAC 4 GTG 2.26 CGC 3 GCG 2.20 CTC 6 GAG 10.40 CCC 1 GGG 4.68 G



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